Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.03■□□□□ 0.32
ATP2A1O14983 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ATP2A1O14983 SCARNA21-201ENST00000517026 139 ntBASIC17.03■□□□□ 0.32
ATP2A1O14983 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
ATP2A1O14983 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP2A1O14983 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A1O14983 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A1O14983 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A1O14983 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP2A1O14983 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A1O14983 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.02■□□□□ 0.32
ATP2A1O14983 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP2A1O14983 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ATP2A1O14983 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP2A1O14983 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 AL161772.1-201ENST00000610494 4412 ntBASIC17.02■□□□□ 0.32
ATP2A1O14983 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP2A1O14983 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP2A1O14983 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP2A1O14983 MAGEA5-201ENST00000446757 942 ntBASIC17.02■□□□□ 0.32
ATP2A1O14983 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP2A1O14983 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.02■□□□□ 0.32
ATP2A1O14983 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP2A1O14983 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP2A1O14983 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A1O14983 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP2A1O14983 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP2A1O14983 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP2A1O14983 AC007292.2-201ENST00000593524 1812 ntBASIC17.02■□□□□ 0.31
ATP2A1O14983 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
ATP2A1O14983 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.02■□□□□ 0.31
ATP2A1O14983 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP2A1O14983 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP2A1O14983 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATP2A1O14983 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP2A1O14983 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP2A1O14983 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP2A1O14983 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATP2A1O14983 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
ATP2A1O14983 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A1O14983 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A1O14983 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A1O14983 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ATP2A1O14983 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A1O14983 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A1O14983 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.01■□□□□ 0.31
ATP2A1O14983 AC007274.2-201ENST00000421675 662 ntBASIC17.01■□□□□ 0.31
ATP2A1O14983 AC078875.1-201ENST00000431907 724 ntBASIC17.01■□□□□ 0.31
ATP2A1O14983 AL645933.1-201ENST00000440087 609 ntBASIC17.01■□□□□ 0.31
ATP2A1O14983 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 RCC2P8-201ENST00000502779 1035 ntBASIC17.01■□□□□ 0.31
ATP2A1O14983 AC134698.3-201ENST00000523880 214 ntBASIC17.01■□□□□ 0.31
ATP2A1O14983 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.01■□□□□ 0.31
ATP2A1O14983 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.01■□□□□ 0.31
ATP2A1O14983 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A1O14983 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ATP2A1O14983 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.01■□□□□ 0.31
ATP2A1O14983 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A1O14983 FGFR3P5-201ENST00000564496 886 ntBASIC17.01■□□□□ 0.31
ATP2A1O14983 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.01■□□□□ 0.31
ATP2A1O14983 AC008805.1-201ENST00000590892 364 ntBASIC17.01■□□□□ 0.31
ATP2A1O14983 AL353770.1-201ENST00000614915 403 ntBASIC17.01■□□□□ 0.31
ATP2A1O14983 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A1O14983 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A1O14983 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms