Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
O00370 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
O00370 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
O00370 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
O00370 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
O00370 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
O00370 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
O00370 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
O00370 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.95■□□□□ 0.14
O00370 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 PDIA3P1-201ENST00000471856 1510 ntBASIC15.95■□□□□ 0.14
O00370 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.95■□□□□ 0.14
O00370 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.95■□□□□ 0.14
O00370 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 CNN2P8-201ENST00000421872 913 ntBASIC15.95■□□□□ 0.14
O00370 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.95■□□□□ 0.14
O00370 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
O00370 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.95■□□□□ 0.14
O00370 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.95■□□□□ 0.14
O00370 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
O00370 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
O00370 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.95■□□□□ 0.14
O00370 MESTP3-201ENST00000503460 968 ntBASIC15.95■□□□□ 0.14
O00370 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 RNA5SP486-201ENST00000515961 83 ntBASIC15.95■□□□□ 0.14
O00370 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
O00370 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.95■□□□□ 0.14
O00370 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.95■□□□□ 0.14
O00370 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.95■□□□□ 0.14
O00370 AL512343.1-201ENST00000605837 169 ntBASIC15.95■□□□□ 0.14
O00370 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
O00370 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.95■□□□□ 0.14
O00370 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
O00370 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.95■□□□□ 0.14
O00370 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.95■□□□□ 0.14
O00370 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
O00370 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.95■□□□□ 0.14
O00370 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.95■□□□□ 0.14
O00370 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
O00370 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.95■□□□□ 0.14
O00370 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.95■□□□□ 0.14
O00370 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
O00370 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
O00370 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.94■□□□□ 0.14
O00370 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.94■□□□□ 0.14
O00370 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
O00370 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 OR2I1P-210ENST00000642037 4691 ntBASIC15.94■□□□□ 0.14
O00370 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
O00370 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
O00370 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.94■□□□□ 0.14
O00370 ARSEP1-201ENST00000420443 635 ntBASIC15.94■□□□□ 0.14
O00370 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.94■□□□□ 0.14
O00370 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.94■□□□□ 0.14
O00370 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
O00370 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.94■□□□□ 0.14
O00370 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.94■□□□□ 0.14
O00370 AC078819.1-201ENST00000547454 765 ntBASIC15.94■□□□□ 0.14
O00370 AC012085.1-201ENST00000548270 765 ntBASIC15.94■□□□□ 0.14
O00370 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.94■□□□□ 0.14
O00370 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.94■□□□□ 0.14
O00370 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
O00370 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.94■□□□□ 0.14
O00370 AC138466.3-201ENST00000619983 221 ntBASIC15.94■□□□□ 0.14
O00370 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.94■□□□□ 0.14
O00370 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.94■□□□□ 0.14
O00370 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms