Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRRM3A6NNA2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
SRRM3A6NNA2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRRM3A6NNA2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRRM3A6NNA2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRRM3A6NNA2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRRM3A6NNA2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 FAM21FP-201ENST00000426241 1131 ntBASIC15.56■□□□□ 0.08
SRRM3A6NNA2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 AL079307.3-201ENST00000556114 283 ntBASIC15.56■□□□□ 0.08
SRRM3A6NNA2 AC044860.1-202ENST00000559481 777 ntBASIC15.56■□□□□ 0.08
SRRM3A6NNA2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.56■□□□□ 0.08
SRRM3A6NNA2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 PDIA3P1-201ENST00000471856 1510 ntBASIC15.56■□□□□ 0.08
SRRM3A6NNA2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRRM3A6NNA2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 AC130686.1-201ENST00000622936 2466 ntBASIC15.55■□□□□ 0.08
SRRM3A6NNA2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 FXNP2-201ENST00000411625 547 ntBASIC15.55■□□□□ 0.08
SRRM3A6NNA2 AC098850.1-201ENST00000419919 790 ntBASIC15.55■□□□□ 0.08
SRRM3A6NNA2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 MPRIPP1-201ENST00000452433 1089 ntBASIC15.55■□□□□ 0.08
SRRM3A6NNA2 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 AC073389.1-201ENST00000595595 795 ntBASIC15.55■□□□□ 0.08
SRRM3A6NNA2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 SRD5A3P1-201ENST00000603021 949 ntBASIC15.55■□□□□ 0.08
SRRM3A6NNA2 AL450472.2-201ENST00000603663 1156 ntBASIC15.55■□□□□ 0.08
SRRM3A6NNA2 AL033527.5-201ENST00000641382 801 ntBASIC15.55■□□□□ 0.08
SRRM3A6NNA2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.55■□□□□ 0.08
SRRM3A6NNA2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms