Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
HFM1A2PYH4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
HFM1A2PYH4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC21.7■■□□□ 1.07
HFM1A2PYH4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HFM1A2PYH4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HFM1A2PYH4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HFM1A2PYH4 AC015802.1-201ENST00000588104 1449 ntBASIC21.7■■□□□ 1.06
HFM1A2PYH4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HFM1A2PYH4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HFM1A2PYH4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 AC079328.1-201ENST00000560358 952 ntBASIC21.7■■□□□ 1.06
HFM1A2PYH4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 AC016629.1-201ENST00000596579 586 ntBASIC21.7■■□□□ 1.06
HFM1A2PYH4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HFM1A2PYH4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HFM1A2PYH4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HFM1A2PYH4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 RNA5SP359-201ENST00000364838 113 ntBASIC21.69■■□□□ 1.06
HFM1A2PYH4 AC239868.1-201ENST00000369385 493 ntBASIC21.69■■□□□ 1.06
HFM1A2PYH4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 AC007274.2-201ENST00000421675 662 ntBASIC21.69■■□□□ 1.06
HFM1A2PYH4 AC092580.1-201ENST00000433998 658 ntBASIC21.69■■□□□ 1.06
HFM1A2PYH4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 AL022334.2-201ENST00000610000 484 ntBASIC21.69■■□□□ 1.06
HFM1A2PYH4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HFM1A2PYH4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC21.69■■□□□ 1.06
HFM1A2PYH4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC21.68■■□□□ 1.06
HFM1A2PYH4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
HFM1A2PYH4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC21.68■■□□□ 1.06
HFM1A2PYH4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
HFM1A2PYH4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC21.68■■□□□ 1.06
HFM1A2PYH4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC21.68■■□□□ 1.06
HFM1A2PYH4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC21.68■■□□□ 1.06
HFM1A2PYH4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC21.68■■□□□ 1.06
HFM1A2PYH4 AC242376.1-201ENST00000559033 726 ntBASIC21.68■■□□□ 1.06
HFM1A2PYH4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 KRT8P19-201ENST00000551916 1455 ntBASIC21.68■■□□□ 1.06
HFM1A2PYH4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC21.68■■□□□ 1.06
HFM1A2PYH4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
HFM1A2PYH4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC21.68■■□□□ 1.06
HFM1A2PYH4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HFM1A2PYH4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HFM1A2PYH4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HFM1A2PYH4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms