Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 EIF3FP3-201ENST00000434851 1086 ntBASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 AC114812.1-204ENST00000449669 728 ntBASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 AC078819.1-201ENST00000547454 765 ntBASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 AC012085.1-201ENST00000548270 765 ntBASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 AC009542.2-202ENST00000619004 1067 ntBASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPDC1A2A3K4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PTPDC1A2A3K4 AC055811.4-201ENST00000624039 1754 ntBASIC17.58■□□□□ 0.41
PTPDC1A2A3K4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.58■□□□□ 0.41
PTPDC1A2A3K4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PTPDC1A2A3K4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
PTPDC1A2A3K4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.58■□□□□ 0.41
PTPDC1A2A3K4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPDC1A2A3K4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.58■□□□□ 0.41
PTPDC1A2A3K4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPDC1A2A3K4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.58■□□□□ 0.41
PTPDC1A2A3K4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PTPDC1A2A3K4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 ACTBP8-201ENST00000403258 1108 ntBASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 AL590640.2-201ENST00000457038 527 ntBASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 AC022494.1-201ENST00000466044 728 ntBASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 AC022616.1-201ENST00000518688 554 ntBASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 MIR4525-201ENST00000580000 75 ntBASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 AC008687.7-202ENST00000637404 953 ntBASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPDC1A2A3K4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 LRRC59-203ENST00000576448 1531 ntBASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 AC023310.1-201ENST00000554836 735 ntBASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPDC1A2A3K4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms