Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 DRD5P1-201ENST00000456605 1438 ntBASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.17□□□□□ -0.3
RHBDD3Q9Y3P4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 MIR770-201ENST00000390219 98 ntBASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 MEP1AP4-201ENST00000423244 1087 ntBASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 VDAC1P7-201ENST00000462417 847 ntBASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 AL049840.4-201ENST00000602422 811 ntBASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 AC152010.1-201ENST00000415779 2006 ntBASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RHBDD3Q9Y3P4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms