Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 MRPL3P1-201ENST00000400109 1033 ntBASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 AL355306.1-201ENST00000415580 579 ntBASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 AC113367.3-201ENST00000508316 1912 ntBASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 AKAP8P1-201ENST00000434743 1349 ntBASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 UXT-AS1-201ENST00000590504 1525 ntBASIC11.81□□□□□ -0.52
RPH3ALQ9UNE2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 SPDYE11-202ENST00000450699 704 ntBASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 SPDYE9P-201ENST00000570642 692 ntBASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 SPDYE10P-202ENST00000612005 668 ntBASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 SPDYE8P-202ENST00000612377 668 ntBASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RPH3ALQ9UNE2 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms