Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 RFNG-202ENST00000429557 994 ntTSL 5 BASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 RN7SL340P-201ENST00000470792 296 ntBASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 AC008021.1-201ENST00000474180 414 ntBASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 AC010202.1-201ENST00000551181 405 ntBASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC22.64■■□□□ 1.22
RIMBP3Q9UFD9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 MED25-209ENST00000612791 881 ntTSL 5 BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 TUBA3GP-201ENST00000410028 1325 ntBASIC22.64■■□□□ 1.21
RIMBP3Q9UFD9 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 RNA5SP420-201ENST00000516997 137 ntBASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC22.63■■□□□ 1.21
RIMBP3Q9UFD9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 ACTBP14-201ENST00000411655 1089 ntBASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 IL6RP1-201ENST00000417848 1273 ntBASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 AC010086.2-201ENST00000428616 226 ntBASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 AF186996.6-201ENST00000485294 149 ntBASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 AP003170.2-201ENST00000544730 786 ntBASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 AC090616.6-202ENST00000583601 1088 ntBASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 AL031768.1-201ENST00000606542 701 ntBASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 PCDHGB8P-201ENST00000502926 1973 ntBASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 AL645608.8-201ENST00000606034 2086 ntBASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RIMBP3Q9UFD9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 NEMF-210ENST00000556672 590 ntTSL 2 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 CDIPT-AS1-203ENST00000638164 713 ntBASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms