Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 AC098614.1-201ENST00000368528 745 ntBASIC12.41□□□□□ -0.42
CALYQ9NYX4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 AC007969.1-201ENST00000433675 447 ntBASIC12.41□□□□□ -0.42
CALYQ9NYX4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 TDH-203ENST00000531764 1110 ntBASIC12.41□□□□□ -0.42
CALYQ9NYX4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 PTP4A1P2-201ENST00000546033 454 ntBASIC12.41□□□□□ -0.42
CALYQ9NYX4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.41□□□□□ -0.42
CALYQ9NYX4 SALL4P5-201ENST00000419001 1760 ntBASIC12.41□□□□□ -0.42
CALYQ9NYX4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CALYQ9NYX4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.4□□□□□ -0.42
CALYQ9NYX4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 AC134312.5-201ENST00000568031 1313 ntBASIC12.4□□□□□ -0.42
CALYQ9NYX4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 AC007191.1-201ENST00000623179 2995 ntBASIC12.4□□□□□ -0.42
CALYQ9NYX4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 BAATP1-201ENST00000412284 1225 ntBASIC12.4□□□□□ -0.42
CALYQ9NYX4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 TLE1P1-201ENST00000422965 589 ntBASIC12.4□□□□□ -0.42
CALYQ9NYX4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 ACTG1P3-201ENST00000431775 1114 ntBASIC12.4□□□□□ -0.42
CALYQ9NYX4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 AC012441.1-201ENST00000446669 685 ntBASIC12.4□□□□□ -0.42
CALYQ9NYX4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 FO681548.1-201ENST00000455617 1132 ntBASIC12.4□□□□□ -0.42
CALYQ9NYX4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 AC068587.3-201ENST00000526613 355 ntBASIC12.4□□□□□ -0.42
CALYQ9NYX4 MIR5189-201ENST00000577370 114 ntBASIC12.4□□□□□ -0.42
CALYQ9NYX4 AC138761.1-201ENST00000584393 385 ntBASIC12.4□□□□□ -0.42
CALYQ9NYX4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 AC010319.3-201ENST00000597028 470 ntBASIC12.4□□□□□ -0.42
CALYQ9NYX4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.4□□□□□ -0.42
CALYQ9NYX4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CALYQ9NYX4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms