Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 AC025181.2-201ENST00000606994 802 ntBASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 PTENP1-202ENST00000532280 3996 ntBASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 INE2-201ENST00000630399 1874 ntBASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 AL133267.1-201ENST00000398220 340 ntBASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 TSSK5P-201ENST00000423978 907 ntBASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 SPTLC1P1-201ENST00000447199 261 ntBASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 AC090505.1-201ENST00000430515 1834 ntBASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCM2LQ9NUG4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 AGGF1P1-201ENST00000509500 2073 ntBASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 AP3S2-216ENST00000617003 1561 ntBASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 AC245100.3-201ENST00000441281 285 ntBASIC14.3□□□□□ -0.12
CCM2LQ9NUG4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms