Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 AC051619.9-201ENST00000623237 597 ntBASIC16.58■□□□□ 0.24
VTA1Q9NP79 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 AL590440.2-201ENST00000641973 1595 ntBASIC16.58■□□□□ 0.24
VTA1Q9NP79 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTA1Q9NP79 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTA1Q9NP79 AC018629.1-201ENST00000623381 1736 ntBASIC16.58■□□□□ 0.24
VTA1Q9NP79 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTA1Q9NP79 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTA1Q9NP79 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VTA1Q9NP79 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTA1Q9NP79 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTA1Q9NP79 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTA1Q9NP79 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTA1Q9NP79 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
VTA1Q9NP79 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VTA1Q9NP79 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 AL136172.1-201ENST00000598590 1394 ntBASIC16.57■□□□□ 0.24
VTA1Q9NP79 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 KRT18P36-201ENST00000411618 1276 ntBASIC16.57■□□□□ 0.24
VTA1Q9NP79 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 AC008723.1-201ENST00000506922 207 ntBASIC16.57■□□□□ 0.24
VTA1Q9NP79 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 AL109837.1-201ENST00000603272 613 ntBASIC16.57■□□□□ 0.24
VTA1Q9NP79 U62317.3-201ENST00000608319 855 ntBASIC16.57■□□□□ 0.24
VTA1Q9NP79 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.57■□□□□ 0.24
VTA1Q9NP79 MIR6769A-201ENST00000617340 73 ntBASIC16.57■□□□□ 0.24
VTA1Q9NP79 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VTA1Q9NP79 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.57■□□□□ 0.24
VTA1Q9NP79 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 AC009093.10-201ENST00000641956 1442 ntBASIC16.56■□□□□ 0.24
VTA1Q9NP79 AHCYP4-201ENST00000419201 1315 ntBASIC16.56■□□□□ 0.24
VTA1Q9NP79 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.56■□□□□ 0.24
VTA1Q9NP79 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 OR2K2-202ENST00000374428 1038 ntBASIC16.56■□□□□ 0.24
VTA1Q9NP79 AL627231.1-201ENST00000394467 1125 ntBASIC16.56■□□□□ 0.24
VTA1Q9NP79 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 AC026320.2-201ENST00000434379 478 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms