Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 Z93015.1-201ENST00000451718 390 ntBASIC17.59■□□□□ 0.41
RNF41Q9H4P4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 RN7SL560P-201ENST00000577943 264 ntBASIC17.59■□□□□ 0.41
RNF41Q9H4P4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF41Q9H4P4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
RNF41Q9H4P4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF41Q9H4P4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF41Q9H4P4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF41Q9H4P4 AC015818.8-201ENST00000587907 1519 ntBASIC17.58■□□□□ 0.41
RNF41Q9H4P4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF41Q9H4P4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 PUDPP3-201ENST00000445368 636 ntBASIC17.58■□□□□ 0.4
RNF41Q9H4P4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 AL136301.1-201ENST00000615830 422 ntBASIC17.58■□□□□ 0.4
RNF41Q9H4P4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RNF41Q9H4P4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 AC126755.1-201ENST00000525846 6405 ntBASIC17.57■□□□□ 0.4
RNF41Q9H4P4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF41Q9H4P4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF41Q9H4P4 OR2I1P-209ENST00000641730 5365 ntBASIC17.56■□□□□ 0.4
RNF41Q9H4P4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNF41Q9H4P4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RNF41Q9H4P4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms