Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 SPTLC1P1-201ENST00000447199 261 ntBASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 UGT1A2P-201ENST00000454886 866 ntBASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 SERBP1P5-201ENST00000510079 1181 ntBASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 FAM207CP-201ENST00000443486 507 ntBASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 AP001582.1-201ENST00000525856 295 ntBASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 AC133539.2-201ENST00000604757 467 ntBASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC68Q9H2F9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC68Q9H2F9 AL359183.1-201ENST00000623796 2132 ntBASIC15.08■□□□□ 0.01
CCDC68Q9H2F9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC68Q9H2F9 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.08■□□□□ 0.01
CCDC68Q9H2F9 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC68Q9H2F9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC68Q9H2F9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CCDC68Q9H2F9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
CCDC68Q9H2F9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
CCDC68Q9H2F9 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC68Q9H2F9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.08■□□□□ 0
CCDC68Q9H2F9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms