Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 AP001160.2-201ENST00000596071 487 ntBASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 AC107373.2-201ENST00000607735 490 ntBASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 AL691403.2-201ENST00000618460 490 ntBASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 CLK3P2-201ENST00000427566 1453 ntBASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.9□□□□□ -0.19
POLR2J3Q9H1A7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.9□□□□□ -0.19
POLR2J3Q9H1A7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
POLR2J3Q9H1A7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 AC135586.1-201ENST00000539323 574 ntBASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 PRSS30P-206ENST00000641773 873 ntBASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 AL359881.3-201ENST00000602640 1721 ntBASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
POLR2J3Q9H1A7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 AC022144.1-201ENST00000602255 1580 ntBASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms