Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11XQ9BZA7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDH11XQ9BZA7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11XQ9BZA7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11XQ9BZA7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11XQ9BZA7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11XQ9BZA7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11XQ9BZA7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PCDH11XQ9BZA7 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDH11XQ9BZA7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDH11XQ9BZA7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 RN7SL277P-201ENST00000481521 288 ntBASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 AC090502.4-201ENST00000551714 1386 ntBASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH11XQ9BZA7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 KRT17P5-201ENST00000332088 839 ntBASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 KRT8P1-201ENST00000557533 1207 ntBASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH11XQ9BZA7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 MIR3180-2-201ENST00000581748 88 ntBASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 KHSRPP1-201ENST00000427983 1768 ntBASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 CICP23-201ENST00000605013 2741 ntBASIC19.04■□□□□ 0.64
PCDH11XQ9BZA7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms