Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL25A1Q9BXS0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 AC138392.1-201ENST00000427577 921 ntBASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 AC005722.1-201ENST00000431878 964 ntBASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 AC007690.1-201ENST00000451924 468 ntBASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 RN7SL33P-201ENST00000462543 342 ntBASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 AF186996.6-201ENST00000485294 149 ntBASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 RN7SKP155-201ENST00000516031 288 ntBASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 KRT8P34-201ENST00000577607 1044 ntBASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 MIR4309-201ENST00000582498 83 ntBASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 BX510359.7-201ENST00000619819 630 ntBASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 AC099552.4-201ENST00000624248 949 ntBASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 ZBED1P1-201ENST00000502364 1930 ntBASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 AC006449.6-201ENST00000612330 2296 ntBASIC14.66□□□□□ -0.06
COL25A1Q9BXS0 AGGF1P1-201ENST00000509500 2073 ntBASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 RNF7-202ENST00000393000 805 ntTSL 2 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 ZNF877P-201ENST00000437614 612 ntBASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 CNN2P1-201ENST00000453616 918 ntBASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 RN7SL684P-201ENST00000465665 294 ntBASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 PARVG-208ENST00000466375 820 ntTSL 2 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 LDHAL6CP-201ENST00000502352 1142 ntBASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 RPL10P8-201ENST00000522888 313 ntBASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 AL132994.1-201ENST00000554098 400 ntBASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 PAX6-247ENST00000638965 979 ntTSL 5 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL25A1Q9BXS0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
COL25A1Q9BXS0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms