Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 AL450472.2-201ENST00000603663 1156 ntBASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1CQ9BQE3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 AC018892.3-201ENST00000623986 2499 ntBASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 AC074338.1-201ENST00000416825 156 ntBASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 NME2P1-201ENST00000426182 414 ntBASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 WASH4P-201ENST00000564273 1246 ntBASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1CQ9BQE3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.14
TUBA1CQ9BQE3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TUBA1CQ9BQE3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TUBA1CQ9BQE3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.21□□□□□ -0.14
TUBA1CQ9BQE3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TUBA1CQ9BQE3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TUBA1CQ9BQE3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
TUBA1CQ9BQE3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TUBA1CQ9BQE3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 COX5BP8-201ENST00000416911 349 ntBASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.2□□□□□ -0.14
TUBA1CQ9BQE3 RPL13P2-201ENST00000440687 659 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms