Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHOX2BQ99453 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHOX2BQ99453 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHOX2BQ99453 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.21■□□□□ 0.03
PHOX2BQ99453 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.21■□□□□ 0.03
PHOX2BQ99453 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.21■□□□□ 0.03
PHOX2BQ99453 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.21■□□□□ 0.02
PHOX2BQ99453 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PHOX2BQ99453 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.21■□□□□ 0.02
PHOX2BQ99453 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.21■□□□□ 0.02
PHOX2BQ99453 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PHOX2BQ99453 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PHOX2BQ99453 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PHOX2BQ99453 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 GGT3P-204ENST00000453783 1664 ntBASIC15.2■□□□□ 0.02
PHOX2BQ99453 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 POM121L9P-203ENST00000441984 1285 ntBASIC15.2■□□□□ 0.02
PHOX2BQ99453 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 AP003398.1-201ENST00000531124 318 ntBASIC15.2■□□□□ 0.02
PHOX2BQ99453 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHOX2BQ99453 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PHOX2BQ99453 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PHOX2BQ99453 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PHOX2BQ99453 AP002414.2-201ENST00000591780 3365 ntBASIC15.19■□□□□ 0.02
PHOX2BQ99453 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PHOX2BQ99453 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PHOX2BQ99453 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PHOX2BQ99453 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PHOX2BQ99453 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PHOX2BQ99453 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PHOX2BQ99453 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.19■□□□□ 0.02
PHOX2BQ99453 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PHOX2BQ99453 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PHOX2BQ99453 AC023141.7-201ENST00000430646 407 ntBASIC15.19■□□□□ 0.02
PHOX2BQ99453 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PHOX2BQ99453 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 AC092473.1-201ENST00000441098 221 ntBASIC15.19■□□□□ 0.02
PHOX2BQ99453 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.19■□□□□ 0.02
PHOX2BQ99453 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms