Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 AC234782.1-201ENST00000451950 919 ntBASIC17.5■□□□□ 0.39
TRIM47Q96LD4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 AC013355.1-201ENST00000562625 723 ntBASIC17.5■□□□□ 0.39
TRIM47Q96LD4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM47Q96LD4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 EIF3FP3-201ENST00000434851 1086 ntBASIC17.49■□□□□ 0.39
TRIM47Q96LD4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 AL023803.2-201ENST00000620080 638 ntBASIC17.49■□□□□ 0.39
TRIM47Q96LD4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM47Q96LD4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM47Q96LD4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms