Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 AC013355.1-201ENST00000562625 723 ntBASIC16.18■□□□□ 0.18
PGBD4Q96DM1 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 AC106872.11-201ENST00000605838 421 ntBASIC16.18■□□□□ 0.18
PGBD4Q96DM1 AC100757.4-201ENST00000626934 759 ntBASIC16.18■□□□□ 0.18
PGBD4Q96DM1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.18■□□□□ 0.18
PGBD4Q96DM1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 AC003102.2-201ENST00000589195 1469 ntBASIC16.17■□□□□ 0.18
PGBD4Q96DM1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 AC004899.1-201ENST00000424687 1714 ntBASIC16.17■□□□□ 0.18
PGBD4Q96DM1 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 AC005324.6-201ENST00000587972 613 ntBASIC16.17■□□□□ 0.18
PGBD4Q96DM1 AL021578.1-201ENST00000613646 709 ntBASIC16.17■□□□□ 0.18
PGBD4Q96DM1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 AC091544.8-201ENST00000619490 361 ntBASIC16.17■□□□□ 0.18
PGBD4Q96DM1 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 TUBBP5-203ENST00000508529 1334 ntBASIC16.17■□□□□ 0.18
PGBD4Q96DM1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PGBD4Q96DM1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 SALL4P5-201ENST00000419001 1760 ntBASIC16.16■□□□□ 0.18
PGBD4Q96DM1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 AC006058.4-201ENST00000624016 1670 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms