Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.9■□□□□ 0.14
SHC3Q92529 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC3Q92529 AC244669.2-201ENST00000612320 853 ntBASIC15.9■□□□□ 0.14
SHC3Q92529 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC3Q92529 AL354718.3-201ENST00000616414 581 ntBASIC15.9■□□□□ 0.14
SHC3Q92529 CR382287.1-201ENST00000623954 586 ntBASIC15.9■□□□□ 0.14
SHC3Q92529 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC3Q92529 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
SHC3Q92529 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SHC3Q92529 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC3Q92529 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SHC3Q92529 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.89■□□□□ 0.13
SHC3Q92529 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.89■□□□□ 0.13
SHC3Q92529 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SHC3Q92529 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.89■□□□□ 0.13
SHC3Q92529 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SHC3Q92529 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.89■□□□□ 0.13
SHC3Q92529 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 CNN2P8-201ENST00000421872 913 ntBASIC15.89■□□□□ 0.13
SHC3Q92529 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.89■□□□□ 0.13
SHC3Q92529 AC016694.1-201ENST00000434179 700 ntBASIC15.89■□□□□ 0.13
SHC3Q92529 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.89■□□□□ 0.13
SHC3Q92529 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.89■□□□□ 0.13
SHC3Q92529 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.89■□□□□ 0.13
SHC3Q92529 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.89■□□□□ 0.13
SHC3Q92529 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.89■□□□□ 0.13
SHC3Q92529 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.89■□□□□ 0.13
SHC3Q92529 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.89■□□□□ 0.13
SHC3Q92529 AC105233.6-201ENST00000642093 218 ntBASIC15.89■□□□□ 0.13
SHC3Q92529 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.89■□□□□ 0.13
SHC3Q92529 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SHC3Q92529 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SHC3Q92529 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.89■□□□□ 0.13
SHC3Q92529 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SHC3Q92529 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.89■□□□□ 0.13
SHC3Q92529 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 AC090505.1-201ENST00000430515 1834 ntBASIC15.89■□□□□ 0.13
SHC3Q92529 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.89■□□□□ 0.13
SHC3Q92529 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SHC3Q92529 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.89■□□□□ 0.13
SHC3Q92529 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SHC3Q92529 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SHC3Q92529 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC3Q92529 AC139712.1-201ENST00000378256 1875 ntBASIC15.88■□□□□ 0.13
SHC3Q92529 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.88■□□□□ 0.13
SHC3Q92529 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 AL590440.2-201ENST00000641973 1595 ntBASIC15.88■□□□□ 0.13
SHC3Q92529 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SHC3Q92529 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.88■□□□□ 0.13
SHC3Q92529 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.88■□□□□ 0.13
SHC3Q92529 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.88■□□□□ 0.13
SHC3Q92529 AC015688.4-201ENST00000580780 1647 ntBASIC15.88■□□□□ 0.13
SHC3Q92529 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SHC3Q92529 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.88■□□□□ 0.13
SHC3Q92529 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.88■□□□□ 0.13
SHC3Q92529 AL035633.1-201ENST00000406139 838 ntBASIC15.88■□□□□ 0.13
SHC3Q92529 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.88■□□□□ 0.13
SHC3Q92529 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.88■□□□□ 0.13
SHC3Q92529 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms