Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 FGD5P1-202ENST00000614866 2498 ntBASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 AC008805.1-201ENST00000590892 364 ntBASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 KHSRPP1-201ENST00000427983 1768 ntBASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEDD1Q8NHV4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 TMBIM7P-202ENST00000641474 1516 ntBASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 AL132994.2-201ENST00000603120 687 ntBASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 AL136295.7-201ENST00000619226 1200 ntBASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 AC136759.1-202ENST00000530858 2194 ntBASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NEDD1Q8NHV4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.27■□□□□ 0.35
NEDD1Q8NHV4 AC009093.10-201ENST00000641956 1442 ntBASIC17.27■□□□□ 0.35
NEDD1Q8NHV4 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.27■□□□□ 0.35
NEDD1Q8NHV4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NEDD1Q8NHV4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
NEDD1Q8NHV4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
NEDD1Q8NHV4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NEDD1Q8NHV4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.27■□□□□ 0.35
NEDD1Q8NHV4 AC006504.5-208ENST00000588784 2401 ntBASIC17.27■□□□□ 0.35
NEDD1Q8NHV4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.27■□□□□ 0.35
NEDD1Q8NHV4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NEDD1Q8NHV4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 AC144522.1-201ENST00000625111 1658 ntBASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 AL008707.1-201ENST00000422498 534 ntBASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms