Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 FO393414.2-201ENST00000405153 598 ntBASIC13.01□□□□□ -0.33
BEST4Q8NFU0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 AC079140.1-201ENST00000508039 487 ntBASIC13.01□□□□□ -0.33
BEST4Q8NFU0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 LINC01225-203ENST00000563550 1244 ntBASIC13.01□□□□□ -0.33
BEST4Q8NFU0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 AC026120.1-201ENST00000611536 926 ntBASIC13.01□□□□□ -0.33
BEST4Q8NFU0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 AL591122.2-201ENST00000624125 1853 ntBASIC13.01□□□□□ -0.33
BEST4Q8NFU0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BEST4Q8NFU0 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
BEST4Q8NFU0 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13□□□□□ -0.33
BEST4Q8NFU0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
BEST4Q8NFU0 AC020658.7-201ENST00000624274 2442 ntBASIC13□□□□□ -0.33
BEST4Q8NFU0 FAM90A12P-201ENST00000519497 2375 ntBASIC13□□□□□ -0.33
BEST4Q8NFU0 FAM90A24P-201ENST00000520792 2369 ntBASIC13□□□□□ -0.33
BEST4Q8NFU0 AC016397.2-201ENST00000624848 1985 ntBASIC13□□□□□ -0.33
BEST4Q8NFU0 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13□□□□□ -0.33
BEST4Q8NFU0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13□□□□□ -0.33
BEST4Q8NFU0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 UXT-AS1-201ENST00000590504 1525 ntBASIC13□□□□□ -0.33
BEST4Q8NFU0 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13□□□□□ -0.33
BEST4Q8NFU0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13□□□□□ -0.33
BEST4Q8NFU0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13□□□□□ -0.33
BEST4Q8NFU0 ADH5P3-201ENST00000433842 1137 ntBASIC13□□□□□ -0.33
BEST4Q8NFU0 FAM58CP-201ENST00000435741 640 ntBASIC13□□□□□ -0.33
BEST4Q8NFU0 RPL13AP23-201ENST00000480739 586 ntBASIC13□□□□□ -0.33
BEST4Q8NFU0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13□□□□□ -0.33
BEST4Q8NFU0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13□□□□□ -0.33
BEST4Q8NFU0 RARRES2P9-201ENST00000565168 469 ntBASIC13□□□□□ -0.33
BEST4Q8NFU0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13□□□□□ -0.33
BEST4Q8NFU0 AC106730.1-201ENST00000566722 1090 ntBASIC13□□□□□ -0.33
BEST4Q8NFU0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13□□□□□ -0.33
BEST4Q8NFU0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13□□□□□ -0.33
BEST4Q8NFU0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13□□□□□ -0.33
BEST4Q8NFU0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13□□□□□ -0.33
BEST4Q8NFU0 AC092902.6-201ENST00000641783 218 ntBASIC13□□□□□ -0.33
BEST4Q8NFU0 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13□□□□□ -0.33
BEST4Q8NFU0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13□□□□□ -0.33
BEST4Q8NFU0 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms