Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 TBCB-211ENST00000589996 724 ntTSL 3 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 TP73-209ENST00000603362 1668 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 LINC01230-201ENST00000625222 3017 ntBASIC4.68□□□□□ -1.66
SYNE1Q8NF91 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 AL136379.1-201ENST00000623471 2642 ntBASIC4.68□□□□□ -1.66
SYNE1Q8NF91 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 AC134915.1-201ENST00000426461 574 ntBASIC4.68□□□□□ -1.66
SYNE1Q8NF91 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 AC245100.5-201ENST00000452108 331 ntBASIC4.68□□□□□ -1.66
SYNE1Q8NF91 AL590640.2-201ENST00000457038 527 ntBASIC4.68□□□□□ -1.66
SYNE1Q8NF91 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 HCG18-245ENST00000602550 559 ntTSL 4 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 AKR7A2P1-201ENST00000460134 915 ntBASIC4.68□□□□□ -1.66
SYNE1Q8NF91 MIR7845-201ENST00000618396 99 ntBASIC4.68□□□□□ -1.66
SYNE1Q8NF91 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 AL138799.1-201ENST00000448213 1675 ntBASIC4.68□□□□□ -1.66
SYNE1Q8NF91 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE1Q8NF91 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 AGER-206ENST00000375070 1463 ntTSL 5 BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 AC006449.5-201ENST00000610658 2098 ntBASIC4.67□□□□□ -1.66
SYNE1Q8NF91 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 CMC1-204ENST00000423894 549 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 IGHJ2P-201ENST00000454480 60 ntBASIC4.67□□□□□ -1.66
SYNE1Q8NF91 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 SLED1-202ENST00000512051 380 ntBASIC4.67□□□□□ -1.66
SYNE1Q8NF91 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SYNE1Q8NF91 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms