Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 AC007686.3-201ENST00000619017 3487 ntBASIC13.15□□□□□ -0.3
CPEB3Q8NE35 AL138709.1-201ENST00000614840 1693 ntBASIC13.15□□□□□ -0.31
CPEB3Q8NE35 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CPEB3Q8NE35 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
CPEB3Q8NE35 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CPEB3Q8NE35 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.15□□□□□ -0.31
CPEB3Q8NE35 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.15□□□□□ -0.31
CPEB3Q8NE35 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.15□□□□□ -0.31
CPEB3Q8NE35 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
CPEB3Q8NE35 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
CPEB3Q8NE35 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 AL355864.2-201ENST00000447420 863 ntBASIC13.14□□□□□ -0.31
CPEB3Q8NE35 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.14□□□□□ -0.31
CPEB3Q8NE35 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 KRT43P-201ENST00000434019 910 ntBASIC13.13□□□□□ -0.31
CPEB3Q8NE35 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.13□□□□□ -0.31
CPEB3Q8NE35 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms