Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATPAF2Q8N5M1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ATPAF2Q8N5M1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATPAF2Q8N5M1 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 AC232323.1-201ENST00000540724 2099 ntBASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 POM121L8P-201ENST00000417732 1281 ntBASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 POM121L9P-203ENST00000441984 1285 ntBASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 GAPDHP21-201ENST00000450301 1010 ntBASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 FTH1P14-201ENST00000482930 551 ntBASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 ECM1P1-201ENST00000604092 1279 ntBASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 CLUHP2-201ENST00000426660 1303 ntBASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.36■□□□□ 0.05
ATPAF2Q8N5M1 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 AC003102.2-201ENST00000589195 1469 ntBASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 AC016694.1-201ENST00000434179 700 ntBASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 AL590640.2-201ENST00000457038 527 ntBASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 LINC00552-201ENST00000625151 2579 ntBASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF2Q8N5M1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms