Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 AC004466.1-201ENST00000599515 1080 ntBASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC83Q8IWF9 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 MYCLP2-201ENST00000449268 967 ntBASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 AC114812.1-204ENST00000449669 728 ntBASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 TSPY16P-201ENST00000449843 468 ntBASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC83Q8IWF9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms