Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.62■□□□□ 0.09
RFX6Q8HWS3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 LINC01230-201ENST00000625222 3017 ntBASIC15.62■□□□□ 0.09
RFX6Q8HWS3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFX6Q8HWS3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.62■□□□□ 0.09
RFX6Q8HWS3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 FAM207CP-201ENST00000443486 507 ntBASIC15.61■□□□□ 0.09
RFX6Q8HWS3 BCRP1-201ENST00000444246 691 ntBASIC15.61■□□□□ 0.09
RFX6Q8HWS3 ELK1P1-201ENST00000485699 580 ntBASIC15.61■□□□□ 0.09
RFX6Q8HWS3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 AC026434.2-201ENST00000506094 1078 ntBASIC15.61■□□□□ 0.09
RFX6Q8HWS3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 AC005252.2-201ENST00000624630 1141 ntBASIC15.61■□□□□ 0.09
RFX6Q8HWS3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFX6Q8HWS3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 AC236430.1-201ENST00000402231 743 ntBASIC15.6■□□□□ 0.09
RFX6Q8HWS3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 API5-211ENST00000534695 560 ntTSL 5 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 RN7SL204P-201ENST00000582831 262 ntBASIC15.6■□□□□ 0.09
RFX6Q8HWS3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.6■□□□□ 0.09
RFX6Q8HWS3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms