Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST3H2AQ7L7L0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST3H2AQ7L7L0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 MRPS18AP1-201ENST00000414458 589 ntBASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 AC018442.1-201ENST00000421439 2061 ntBASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HIST3H2AQ7L7L0 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 AC093525.8-201ENST00000624099 1342 ntBASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 GNAQP1-201ENST00000444815 1067 ntBASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 AL157414.3-201ENST00000624276 1954 ntBASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms