Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP50Q70EL3 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.22■□□□□ 0.35
USP50Q70EL3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.22■□□□□ 0.35
USP50Q70EL3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.22■□□□□ 0.35
USP50Q70EL3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.22■□□□□ 0.35
USP50Q70EL3 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.22■□□□□ 0.35
USP50Q70EL3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.22■□□□□ 0.35
USP50Q70EL3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.22■□□□□ 0.35
USP50Q70EL3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
USP50Q70EL3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
USP50Q70EL3 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
USP50Q70EL3 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
USP50Q70EL3 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC17.22■□□□□ 0.35
USP50Q70EL3 AF274858.1-201ENST00000406288 372 ntBASIC17.22■□□□□ 0.35
USP50Q70EL3 BPIFB5P-201ENST00000457066 1099 ntBASIC17.22■□□□□ 0.35
USP50Q70EL3 RN7SL564P-201ENST00000496309 250 ntBASIC17.22■□□□□ 0.35
USP50Q70EL3 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
USP50Q70EL3 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC17.22■□□□□ 0.35
USP50Q70EL3 AL133467.4-201ENST00000602953 725 ntBASIC17.22■□□□□ 0.35
USP50Q70EL3 AC008972.2-201ENST00000606587 494 ntBASIC17.22■□□□□ 0.35
USP50Q70EL3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.22■□□□□ 0.35
USP50Q70EL3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 AL109809.1-201ENST00000418979 1367 ntBASIC17.22■□□□□ 0.35
USP50Q70EL3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC17.22■□□□□ 0.35
USP50Q70EL3 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.22■□□□□ 0.35
USP50Q70EL3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.22■□□□□ 0.35
USP50Q70EL3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP50Q70EL3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.21■□□□□ 0.35
USP50Q70EL3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
USP50Q70EL3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.21■□□□□ 0.35
USP50Q70EL3 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.21■□□□□ 0.35
USP50Q70EL3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
USP50Q70EL3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
USP50Q70EL3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.21■□□□□ 0.35
USP50Q70EL3 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
USP50Q70EL3 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.21■□□□□ 0.35
USP50Q70EL3 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.21■□□□□ 0.35
USP50Q70EL3 AC013553.1-201ENST00000560906 267 ntBASIC17.21■□□□□ 0.35
USP50Q70EL3 TRMT112P3-201ENST00000580149 358 ntBASIC17.21■□□□□ 0.35
USP50Q70EL3 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC17.21■□□□□ 0.35
USP50Q70EL3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.21■□□□□ 0.35
USP50Q70EL3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
USP50Q70EL3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.21■□□□□ 0.35
USP50Q70EL3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
USP50Q70EL3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.21■□□□□ 0.35
USP50Q70EL3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP50Q70EL3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
USP50Q70EL3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
USP50Q70EL3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
USP50Q70EL3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
USP50Q70EL3 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
USP50Q70EL3 AGGF1P1-201ENST00000509500 2073 ntBASIC17.2■□□□□ 0.34
USP50Q70EL3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.2■□□□□ 0.34
USP50Q70EL3 AC139712.1-201ENST00000378256 1875 ntBASIC17.2■□□□□ 0.34
USP50Q70EL3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP50Q70EL3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
USP50Q70EL3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP50Q70EL3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP50Q70EL3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP50Q70EL3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
USP50Q70EL3 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP50Q70EL3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP50Q70EL3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.2■□□□□ 0.34
USP50Q70EL3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
USP50Q70EL3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP50Q70EL3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.2■□□□□ 0.34
USP50Q70EL3 AC092135.3-201ENST00000624151 1846 ntBASIC17.2■□□□□ 0.34
USP50Q70EL3 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms