Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.19□□□□□ -0.3
C11orf88Q6PI97 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 AC008267.7-201ENST00000624570 1194 ntBASIC13.19□□□□□ -0.3
C11orf88Q6PI97 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 WASH3P-207ENST00000560956 1394 ntBASIC13.19□□□□□ -0.3
C11orf88Q6PI97 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 FO538757.1-201ENST00000623083 1397 ntBASIC13.19□□□□□ -0.3
C11orf88Q6PI97 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 COL6A4P2-202ENST00000504443 2753 ntBASIC13.18□□□□□ -0.3
C11orf88Q6PI97 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 BASP1P1-201ENST00000430708 665 ntBASIC13.18□□□□□ -0.3
C11orf88Q6PI97 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 AC093520.2-201ENST00000561830 333 ntBASIC13.18□□□□□ -0.3
C11orf88Q6PI97 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 AJ011932.1-201ENST00000621707 465 ntBASIC13.18□□□□□ -0.3
C11orf88Q6PI97 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 AL589702.1-201ENST00000641229 1509 ntBASIC13.18□□□□□ -0.3
C11orf88Q6PI97 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
C11orf88Q6PI97 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C11orf88Q6PI97 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms