Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 AC005962.1-201ENST00000584100 773 ntBASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 AC008805.1-201ENST00000590892 364 ntBASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 AC026740.1-201ENST00000607068 791 ntBASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 TUBBP5-203ENST00000508529 1334 ntBASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 MBLAC2-202ENST00000514906 1936 ntBASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC27A1Q6PCB7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 AC018442.1-201ENST00000421439 2061 ntBASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 SLC25A24P2-201ENST00000415059 510 ntBASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 VDAC1P1-201ENST00000439229 848 ntBASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 IGHJ2P-201ENST00000454480 60 ntBASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 HLA-J-204ENST00000495278 958 ntBASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 SNORD3B-2-202ENST00000571722 791 ntBASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 AC100757.4-201ENST00000626934 759 ntBASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC27A1Q6PCB7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC27A1Q6PCB7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SLC27A1Q6PCB7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLC27A1Q6PCB7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLC27A1Q6PCB7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC27A1Q6PCB7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms