Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF43Q68DV7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF43Q68DV7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RNF43Q68DV7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF43Q68DV7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF43Q68DV7 AC023024.2-201ENST00000623561 1993 ntBASIC15.75■□□□□ 0.11
RNF43Q68DV7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF43Q68DV7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 KRT8P35-201ENST00000483942 1338 ntBASIC15.74■□□□□ 0.11
RNF43Q68DV7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 AC016694.1-201ENST00000434179 700 ntBASIC15.74■□□□□ 0.11
RNF43Q68DV7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 KRT18P25-201ENST00000508931 1278 ntBASIC15.74■□□□□ 0.11
RNF43Q68DV7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 AC244669.2-201ENST00000612320 853 ntBASIC15.74■□□□□ 0.11
RNF43Q68DV7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 KRT8P14-201ENST00000414254 1442 ntBASIC15.74■□□□□ 0.11
RNF43Q68DV7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF43Q68DV7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF43Q68DV7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.73■□□□□ 0.11
RNF43Q68DV7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 SLC25A24P2-201ENST00000415059 510 ntBASIC15.73■□□□□ 0.11
RNF43Q68DV7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 RNA5SP423-201ENST00000517127 109 ntBASIC15.73■□□□□ 0.11
RNF43Q68DV7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 AC079316.1-201ENST00000548397 411 ntBASIC15.73■□□□□ 0.11
RNF43Q68DV7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms