Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 AC120045.2-201ENST00000567334 178 ntBASIC14.43□□□□□ -0.1
RFTN2Q52LD8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 AC092135.3-201ENST00000624151 1846 ntBASIC14.43□□□□□ -0.1
RFTN2Q52LD8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 AC104581.4-201ENST00000623126 3052 ntBASIC14.43□□□□□ -0.1
RFTN2Q52LD8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 AC134915.1-201ENST00000426461 574 ntBASIC14.42□□□□□ -0.1
RFTN2Q52LD8 BASP1P1-201ENST00000430708 665 ntBASIC14.42□□□□□ -0.1
RFTN2Q52LD8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 AC005498.2-205ENST00000593218 784 ntBASIC14.42□□□□□ -0.1
RFTN2Q52LD8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 AC007431.3-201ENST00000623221 587 ntBASIC14.42□□□□□ -0.1
RFTN2Q52LD8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFTN2Q52LD8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFTN2Q52LD8 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms