Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.51□□□□□ -0.25
CDK5Q00535 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.51□□□□□ -0.25
CDK5Q00535 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.51□□□□□ -0.25
CDK5Q00535 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.51□□□□□ -0.25
CDK5Q00535 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.51□□□□□ -0.25
CDK5Q00535 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.51□□□□□ -0.25
CDK5Q00535 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CDK5Q00535 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.51□□□□□ -0.25
CDK5Q00535 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.51□□□□□ -0.25
CDK5Q00535 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.51□□□□□ -0.25
CDK5Q00535 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.51□□□□□ -0.25
CDK5Q00535 AC015911.4-201ENST00000588022 1070 ntBASIC13.51□□□□□ -0.25
CDK5Q00535 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDK5Q00535 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.51□□□□□ -0.25
CDK5Q00535 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.51□□□□□ -0.25
CDK5Q00535 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.51□□□□□ -0.25
CDK5Q00535 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CDK5Q00535 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDK5Q00535 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.51□□□□□ -0.25
CDK5Q00535 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDK5Q00535 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.51□□□□□ -0.25
CDK5Q00535 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CDK5Q00535 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDK5Q00535 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 AC067750.1-201ENST00000608826 6545 ntBASIC13.5□□□□□ -0.25
CDK5Q00535 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CDK5Q00535 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.5□□□□□ -0.25
CDK5Q00535 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.5□□□□□ -0.25
CDK5Q00535 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.5□□□□□ -0.25
CDK5Q00535 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CDK5Q00535 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.5□□□□□ -0.25
CDK5Q00535 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.5□□□□□ -0.25
CDK5Q00535 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.5□□□□□ -0.25
CDK5Q00535 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.5□□□□□ -0.25
CDK5Q00535 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.5□□□□□ -0.25
CDK5Q00535 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.5□□□□□ -0.25
CDK5Q00535 BX842568.4-201ENST00000421222 227 ntBASIC13.5□□□□□ -0.25
CDK5Q00535 AC009477.1-201ENST00000452936 217 ntBASIC13.5□□□□□ -0.25
CDK5Q00535 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.5□□□□□ -0.25
CDK5Q00535 AC097493.3-201ENST00000509725 367 ntBASIC13.5□□□□□ -0.25
CDK5Q00535 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.5□□□□□ -0.25
CDK5Q00535 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CDK5Q00535 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.5□□□□□ -0.25
CDK5Q00535 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.5□□□□□ -0.25
CDK5Q00535 AL049840.4-201ENST00000602422 811 ntBASIC13.5□□□□□ -0.25
CDK5Q00535 SRD5A3P1-201ENST00000603021 949 ntBASIC13.5□□□□□ -0.25
CDK5Q00535 AL158211.3-201ENST00000607385 239 ntBASIC13.5□□□□□ -0.25
CDK5Q00535 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CDK5Q00535 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.5□□□□□ -0.25
CDK5Q00535 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.5□□□□□ -0.25
CDK5Q00535 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 SALL4P5-201ENST00000419001 1760 ntBASIC13.5□□□□□ -0.25
CDK5Q00535 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.5□□□□□ -0.25
CDK5Q00535 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDK5Q00535 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.5□□□□□ -0.25
CDK5Q00535 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.5□□□□□ -0.25
CDK5Q00535 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.49□□□□□ -0.25
CDK5Q00535 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
CDK5Q00535 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.49□□□□□ -0.25
CDK5Q00535 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.49□□□□□ -0.25
CDK5Q00535 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDK5Q00535 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms