Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC022001.3-201ENST00000606330 596 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 URAHP-205ENST00000610227 398 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC8.89□□□□□ -0.99
HSPG2P98160 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 FAM86FP-201ENST00000338711 969 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC8.89□□□□□ -0.99
HSPG2P98160 RNU1-80P-201ENST00000459500 161 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 OR3A1-202ENST00000615105 966 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 KHSRPP1-201ENST00000427983 1768 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC8.89□□□□□ -0.99
HSPG2P98160 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
HSPG2P98160 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
HSPG2P98160 AC007881.1-201ENST00000437460 187 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 RN7SL672P-201ENST00000474091 317 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC8.89□□□□□ -0.99
HSPG2P98160 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC8.89□□□□□ -0.99
HSPG2P98160 RN7SL605P-201ENST00000577229 281 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 AC132812.1-201ENST00000583145 892 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 AC022966.2-201ENST00000587434 367 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
HSPG2P98160 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 SSR4P1-203ENST00000599569 2260 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 RN7SL788P-201ENST00000460504 316 ntBASIC8.88□□□□□ -0.99
HSPG2P98160 NDUFB10P1-201ENST00000567319 521 ntBASIC8.88□□□□□ -0.99
HSPG2P98160 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC8.88□□□□□ -0.99
HSPG2P98160 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC8.88□□□□□ -0.99
HSPG2P98160 ST13P19-201ENST00000442505 1124 ntBASIC8.88□□□□□ -0.99
HSPG2P98160 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC8.88□□□□□ -0.99
HSPG2P98160 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC8.88□□□□□ -0.99
HSPG2P98160 AC009041.4-201ENST00000620075 638 ntBASIC8.88□□□□□ -0.99
HSPG2P98160 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
HSPG2P98160 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
HSPG2P98160 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC8.88□□□□□ -0.99
HSPG2P98160 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 AC009093.10-201ENST00000641956 1442 ntBASIC8.88□□□□□ -0.99
HSPG2P98160 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 RPL13AP3-202ENST00000494676 1473 ntBASIC8.88□□□□□ -0.99
HSPG2P98160 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
HSPG2P98160 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 HNRNPA1P21-201ENST00000424115 961 ntBASIC8.88□□□□□ -0.99
HSPG2P98160 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC8.88□□□□□ -0.99
HSPG2P98160 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
HSPG2P98160 YY1P2-201ENST00000438766 948 ntBASIC8.88□□□□□ -0.99
HSPG2P98160 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 AC007679.1-201ENST00000458609 502 ntBASIC8.88□□□□□ -0.99
HSPG2P98160 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC8.88□□□□□ -0.99
HSPG2P98160 SNORD3B-1-201ENST00000577988 758 ntBASIC8.88□□□□□ -0.99
HSPG2P98160 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC8.88□□□□□ -0.99
HSPG2P98160 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms