Protein–RNA interactions for Protein: P61204

ARF3, ADP-ribosylation factor 3, humanhuman

Predicted RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3P61204 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARF3P61204 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ARF3P61204 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ARF3P61204 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ARF3P61204 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ARF3P61204 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ARF3P61204 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARF3P61204 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ARF3P61204 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ARF3P61204 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ARF3P61204 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ARF3P61204 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ARF3P61204 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ARF3P61204 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.28□□□□□ -0.12
ARF3P61204 CICP23-201ENST00000605013 2741 ntBASIC14.28□□□□□ -0.12
ARF3P61204 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
ARF3P61204 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ARF3P61204 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.28□□□□□ -0.12
ARF3P61204 AC004945.1-201ENST00000416738 983 ntBASIC14.28□□□□□ -0.12
ARF3P61204 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.28□□□□□ -0.12
ARF3P61204 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.28□□□□□ -0.12
ARF3P61204 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.28□□□□□ -0.12
ARF3P61204 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.28□□□□□ -0.12
ARF3P61204 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.28□□□□□ -0.12
ARF3P61204 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 KRT8P4-201ENST00000509735 1454 ntBASIC14.28□□□□□ -0.12
ARF3P61204 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ARF3P61204 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.28□□□□□ -0.12
ARF3P61204 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.28□□□□□ -0.12
ARF3P61204 PPY2P-201ENST00000582808 702 ntBASIC14.28□□□□□ -0.12
ARF3P61204 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.28□□□□□ -0.12
ARF3P61204 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ARF3P61204 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ARF3P61204 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ARF3P61204 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ARF3P61204 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ARF3P61204 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.27□□□□□ -0.12
ARF3P61204 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.27□□□□□ -0.12
ARF3P61204 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.27□□□□□ -0.12
ARF3P61204 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ARF3P61204 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARF3P61204 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARF3P61204 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ARF3P61204 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.27□□□□□ -0.12
ARF3P61204 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.27□□□□□ -0.12
ARF3P61204 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ARF3P61204 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.27□□□□□ -0.12
ARF3P61204 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.27□□□□□ -0.12
ARF3P61204 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARF3P61204 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARF3P61204 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARF3P61204 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ARF3P61204 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
ARF3P61204 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
ARF3P61204 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ARF3P61204 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ARF3P61204 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.27□□□□□ -0.12
ARF3P61204 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARF3P61204 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARF3P61204 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARF3P61204 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
ARF3P61204 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ARF3P61204 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ARF3P61204 RN7SKP175-201ENST00000408472 289 ntBASIC14.27□□□□□ -0.13
ARF3P61204 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.27□□□□□ -0.13
ARF3P61204 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms