Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.5■□□□□ 0.71
RIPK4P57078 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.5■□□□□ 0.71
RIPK4P57078 AC104982.3-201ENST00000581995 514 ntBASIC19.5■□□□□ 0.71
RIPK4P57078 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.5■□□□□ 0.71
RIPK4P57078 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.5■□□□□ 0.71
RIPK4P57078 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC19.5■□□□□ 0.71
RIPK4P57078 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 E2F3P2-201ENST00000447755 1422 ntBASIC19.5■□□□□ 0.71
RIPK4P57078 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
RIPK4P57078 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 MRPL37P1-201ENST00000592451 1337 ntBASIC19.5■□□□□ 0.71
RIPK4P57078 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK4P57078 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
RIPK4P57078 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RIPK4P57078 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 AL354877.1-201ENST00000424412 413 ntBASIC19.49■□□□□ 0.71
RIPK4P57078 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RIPK4P57078 PFN1P12-201ENST00000455938 534 ntBASIC19.49■□□□□ 0.71
RIPK4P57078 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.49■□□□□ 0.71
RIPK4P57078 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.49■□□□□ 0.71
RIPK4P57078 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.49■□□□□ 0.71
RIPK4P57078 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.49■□□□□ 0.71
RIPK4P57078 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.49■□□□□ 0.71
RIPK4P57078 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.49■□□□□ 0.71
RIPK4P57078 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.49■□□□□ 0.71
RIPK4P57078 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RIPK4P57078 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RIPK4P57078 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RIPK4P57078 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RIPK4P57078 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC19.49■□□□□ 0.71
RIPK4P57078 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIPK4P57078 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RIPK4P57078 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.48■□□□□ 0.71
RIPK4P57078 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RIPK4P57078 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.48■□□□□ 0.71
RIPK4P57078 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 AC018735.1-201ENST00000437208 1502 ntBASIC19.48■□□□□ 0.71
RIPK4P57078 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 PUDPP3-201ENST00000445368 636 ntBASIC19.48■□□□□ 0.71
RIPK4P57078 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.48■□□□□ 0.71
RIPK4P57078 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.48■□□□□ 0.71
RIPK4P57078 AC005730.2-201ENST00000564549 1184 ntBASIC19.48■□□□□ 0.71
RIPK4P57078 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.48■□□□□ 0.71
RIPK4P57078 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.48■□□□□ 0.71
RIPK4P57078 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
RIPK4P57078 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RIPK4P57078 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RIPK4P57078 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC19.48■□□□□ 0.71
RIPK4P57078 AC092135.3-201ENST00000624151 1846 ntBASIC19.48■□□□□ 0.71
RIPK4P57078 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RIPK4P57078 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC19.48■□□□□ 0.71
RIPK4P57078 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RIPK4P57078 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC19.48■□□□□ 0.71
RIPK4P57078 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RIPK4P57078 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RIPK4P57078 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC19.48■□□□□ 0.71
RIPK4P57078 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RIPK4P57078 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC19.47■□□□□ 0.71
RIPK4P57078 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK4P57078 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC19.47■□□□□ 0.71
RIPK4P57078 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RIPK4P57078 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPK4P57078 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms