Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NKX2-5P52952 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX2-5P52952 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.71□□□□□ -0.37
NKX2-5P52952 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
NKX2-5P52952 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
NKX2-5P52952 ECEL1P3-201ENST00000427961 737 ntBASIC12.71□□□□□ -0.37
NKX2-5P52952 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX2-5P52952 AL359075.1-203ENST00000462729 1002 ntBASIC12.71□□□□□ -0.37
NKX2-5P52952 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
NKX2-5P52952 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.71□□□□□ -0.37
NKX2-5P52952 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.71□□□□□ -0.37
NKX2-5P52952 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.71□□□□□ -0.37
NKX2-5P52952 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.71□□□□□ -0.37
NKX2-5P52952 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.71□□□□□ -0.37
NKX2-5P52952 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
NKX2-5P52952 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NKX2-5P52952 AP000525.1-201ENST00000608286 694 ntBASIC12.71□□□□□ -0.37
NKX2-5P52952 ITM2C-210ENST00000620962 501 ntBASIC12.71□□□□□ -0.37
NKX2-5P52952 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NKX2-5P52952 AC124864.1-201ENST00000623408 392 ntBASIC12.71□□□□□ -0.37
NKX2-5P52952 STRCP1-201ENST00000509801 5328 ntBASIC12.71□□□□□ -0.37
NKX2-5P52952 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-5P52952 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NKX2-5P52952 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
NKX2-5P52952 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NKX2-5P52952 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.71□□□□□ -0.38
NKX2-5P52952 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NKX2-5P52952 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NKX2-5P52952 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NKX2-5P52952 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NKX2-5P52952 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NKX2-5P52952 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.71□□□□□ -0.38
NKX2-5P52952 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.71□□□□□ -0.38
NKX2-5P52952 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
NKX2-5P52952 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NKX2-5P52952 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NKX2-5P52952 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
NKX2-5P52952 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.71□□□□□ -0.38
NKX2-5P52952 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NKX2-5P52952 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX2-5P52952 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
NKX2-5P52952 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX2-5P52952 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NKX2-5P52952 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.7□□□□□ -0.38
NKX2-5P52952 AC005696.4-201ENST00000614400 3147 ntBASIC12.7□□□□□ -0.38
NKX2-5P52952 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.7□□□□□ -0.38
NKX2-5P52952 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
NKX2-5P52952 UNC93B2-201ENST00000285383 730 ntBASIC12.7□□□□□ -0.38
NKX2-5P52952 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.7□□□□□ -0.38
NKX2-5P52952 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX2-5P52952 AC012618.2-201ENST00000428058 849 ntBASIC12.7□□□□□ -0.38
NKX2-5P52952 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.7□□□□□ -0.38
NKX2-5P52952 RBM17P1-201ENST00000453646 1190 ntBASIC12.7□□□□□ -0.38
NKX2-5P52952 RN7SL606P-201ENST00000472779 293 ntBASIC12.7□□□□□ -0.38
NKX2-5P52952 AC243562.2-201ENST00000561247 970 ntBASIC12.7□□□□□ -0.38
NKX2-5P52952 AP003071.4-201ENST00000562276 1284 ntBASIC12.7□□□□□ -0.38
NKX2-5P52952 AC005412.3-201ENST00000580309 715 ntBASIC12.7□□□□□ -0.38
NKX2-5P52952 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX2-5P52952 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
NKX2-5P52952 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
NKX2-5P52952 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
NKX2-5P52952 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
NKX2-5P52952 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-5P52952 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms