Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC16.6■□□□□ 0.25
TM4SF4P48230 AC092570.1-201ENST00000414446 469 ntBASIC16.6■□□□□ 0.25
TM4SF4P48230 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC16.6■□□□□ 0.25
TM4SF4P48230 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC16.6■□□□□ 0.25
TM4SF4P48230 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.6■□□□□ 0.25
TM4SF4P48230 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.6■□□□□ 0.25
TM4SF4P48230 MED11-202ENST00000573708 802 ntTSL 2 BASIC16.6■□□□□ 0.25
TM4SF4P48230 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 AC092135.3-201ENST00000624151 1846 ntBASIC16.6■□□□□ 0.25
TM4SF4P48230 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.6■□□□□ 0.25
TM4SF4P48230 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.6■□□□□ 0.25
TM4SF4P48230 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.6■□□□□ 0.25
TM4SF4P48230 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TM4SF4P48230 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.59■□□□□ 0.25
TM4SF4P48230 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.59■□□□□ 0.25
TM4SF4P48230 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TM4SF4P48230 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
TM4SF4P48230 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.59■□□□□ 0.25
TM4SF4P48230 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.59■□□□□ 0.25
TM4SF4P48230 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TM4SF4P48230 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.59■□□□□ 0.25
TM4SF4P48230 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.59■□□□□ 0.25
TM4SF4P48230 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC16.59■□□□□ 0.25
TM4SF4P48230 GRPEL2P1-201ENST00000453145 339 ntBASIC16.59■□□□□ 0.25
TM4SF4P48230 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
TM4SF4P48230 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC16.59■□□□□ 0.25
TM4SF4P48230 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.59■□□□□ 0.25
TM4SF4P48230 RN7SL288P-201ENST00000490496 291 ntBASIC16.59■□□□□ 0.25
TM4SF4P48230 RN7SL375P-201ENST00000492442 298 ntBASIC16.59■□□□□ 0.25
TM4SF4P48230 BCL2L12P1-201ENST00000508390 733 ntBASIC16.59■□□□□ 0.25
TM4SF4P48230 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC16.59■□□□□ 0.25
TM4SF4P48230 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.59■□□□□ 0.25
TM4SF4P48230 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC16.59■□□□□ 0.25
TM4SF4P48230 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.59■□□□□ 0.25
TM4SF4P48230 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TM4SF4P48230 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC16.59■□□□□ 0.25
TM4SF4P48230 AC011462.4-201ENST00000616866 449 ntBASIC16.59■□□□□ 0.25
TM4SF4P48230 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC16.59■□□□□ 0.25
TM4SF4P48230 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TM4SF4P48230 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.59■□□□□ 0.25
TM4SF4P48230 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF4P48230 LINC01101-201ENST00000622953 1884 ntBASIC16.59■□□□□ 0.25
TM4SF4P48230 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.58■□□□□ 0.25
TM4SF4P48230 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TM4SF4P48230 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TM4SF4P48230 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TM4SF4P48230 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.58■□□□□ 0.25
TM4SF4P48230 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TM4SF4P48230 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TM4SF4P48230 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TM4SF4P48230 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TM4SF4P48230 SNX15-201ENST00000352068 771 ntTSL 5 BASIC16.58■□□□□ 0.24
TM4SF4P48230 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.58■□□□□ 0.24
TM4SF4P48230 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.58■□□□□ 0.24
TM4SF4P48230 PSAT1P2-201ENST00000426107 972 ntBASIC16.58■□□□□ 0.24
TM4SF4P48230 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TM4SF4P48230 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC16.58■□□□□ 0.24
TM4SF4P48230 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.58■□□□□ 0.24
TM4SF4P48230 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC16.58■□□□□ 0.24
TM4SF4P48230 KRT18P37-201ENST00000520711 1282 ntBASIC16.58■□□□□ 0.24
TM4SF4P48230 VENTXP3-201ENST00000546480 773 ntBASIC16.58■□□□□ 0.24
TM4SF4P48230 AC023968.2-201ENST00000560593 1049 ntBASIC16.58■□□□□ 0.24
TM4SF4P48230 AC145285.5-201ENST00000562217 361 ntBASIC16.58■□□□□ 0.24
TM4SF4P48230 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.58■□□□□ 0.24
TM4SF4P48230 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC16.58■□□□□ 0.24
TM4SF4P48230 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC16.58■□□□□ 0.24
TM4SF4P48230 AL359091.4-201ENST00000610052 409 ntBASIC16.58■□□□□ 0.24
TM4SF4P48230 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC16.58■□□□□ 0.24
TM4SF4P48230 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.58■□□□□ 0.24
TM4SF4P48230 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC16.58■□□□□ 0.24
TM4SF4P48230 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TM4SF4P48230 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms