Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEDD4P46934 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEDD4P46934 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEDD4P46934 GOLGA2P4-201ENST00000441462 777 ntBASIC17.53■□□□□ 0.4
NEDD4P46934 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEDD4P46934 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NEDD4P46934 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NEDD4P46934 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.53■□□□□ 0.4
NEDD4P46934 BX088702.1-201ENST00000610784 235 ntBASIC17.53■□□□□ 0.4
NEDD4P46934 AL136301.1-201ENST00000615830 422 ntBASIC17.53■□□□□ 0.4
NEDD4P46934 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEDD4P46934 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.53■□□□□ 0.4
NEDD4P46934 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEDD4P46934 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEDD4P46934 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEDD4P46934 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.53■□□□□ 0.4
NEDD4P46934 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NEDD4P46934 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NEDD4P46934 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.53■□□□□ 0.4
NEDD4P46934 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEDD4P46934 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.53■□□□□ 0.4
NEDD4P46934 TUBB1P2-201ENST00000422712 1306 ntBASIC17.53■□□□□ 0.4
NEDD4P46934 TUBB1P1-201ENST00000503144 1300 ntBASIC17.53■□□□□ 0.4
NEDD4P46934 MRPL37P1-201ENST00000592451 1337 ntBASIC17.53■□□□□ 0.4
NEDD4P46934 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.53■□□□□ 0.4
NEDD4P46934 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEDD4P46934 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEDD4P46934 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.53■□□□□ 0.4
NEDD4P46934 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEDD4P46934 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.53■□□□□ 0.4
NEDD4P46934 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.53■□□□□ 0.4
NEDD4P46934 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
NEDD4P46934 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.52■□□□□ 0.4
NEDD4P46934 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
NEDD4P46934 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEDD4P46934 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NEDD4P46934 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NEDD4P46934 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEDD4P46934 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.52■□□□□ 0.4
NEDD4P46934 MIR1908-201ENST00000410394 80 ntBASIC17.52■□□□□ 0.4
NEDD4P46934 AC010141.1-201ENST00000411585 623 ntBASIC17.52■□□□□ 0.4
NEDD4P46934 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NEDD4P46934 MTX1P1-201ENST00000440904 838 ntBASIC17.52■□□□□ 0.4
NEDD4P46934 PUDPP3-201ENST00000445368 636 ntBASIC17.52■□□□□ 0.4
NEDD4P46934 Z93015.1-201ENST00000451718 390 ntBASIC17.52■□□□□ 0.4
NEDD4P46934 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.52■□□□□ 0.4
NEDD4P46934 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.52■□□□□ 0.4
NEDD4P46934 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NEDD4P46934 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.52■□□□□ 0.4
NEDD4P46934 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.52■□□□□ 0.4
NEDD4P46934 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.52■□□□□ 0.4
NEDD4P46934 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.52■□□□□ 0.4
NEDD4P46934 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEDD4P46934 E2F3P2-201ENST00000447755 1422 ntBASIC17.52■□□□□ 0.4
NEDD4P46934 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEDD4P46934 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEDD4P46934 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEDD4P46934 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
NEDD4P46934 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.52■□□□□ 0.4
NEDD4P46934 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NEDD4P46934 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NEDD4P46934 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NEDD4P46934 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NEDD4P46934 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
NEDD4P46934 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NEDD4P46934 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NEDD4P46934 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NEDD4P46934 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
NEDD4P46934 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NEDD4P46934 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 MIR326-201ENST00000362220 95 ntBASIC17.51■□□□□ 0.39
NEDD4P46934 AC079178.1-201ENST00000420915 656 ntBASIC17.51■□□□□ 0.39
NEDD4P46934 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.51■□□□□ 0.39
NEDD4P46934 AC244107.1-201ENST00000442033 332 ntBASIC17.51■□□□□ 0.39
NEDD4P46934 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 HSPB1P2-201ENST00000448722 546 ntBASIC17.51■□□□□ 0.39
NEDD4P46934 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.51■□□□□ 0.39
NEDD4P46934 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.51■□□□□ 0.39
NEDD4P46934 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
NEDD4P46934 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.51■□□□□ 0.39
NEDD4P46934 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 AC005695.3-201ENST00000614522 232 ntBASIC17.51■□□□□ 0.39
NEDD4P46934 AL096828.3-201ENST00000615354 462 ntBASIC17.51■□□□□ 0.39
NEDD4P46934 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NEDD4P46934 AC097359.2-201ENST00000604992 2389 ntBASIC17.51■□□□□ 0.39
NEDD4P46934 AL590440.2-201ENST00000641973 1595 ntBASIC17.51■□□□□ 0.39
NEDD4P46934 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEDD4P46934 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NEDD4P46934 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.51■□□□□ 0.39
NEDD4P46934 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms