Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3CBP42338 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PIK3CBP42338 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.41□□□□□ -0.1
PIK3CBP42338 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.41□□□□□ -0.1
PIK3CBP42338 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.41□□□□□ -0.1
PIK3CBP42338 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PIK3CBP42338 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PIK3CBP42338 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PIK3CBP42338 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3CBP42338 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.41□□□□□ -0.1
PIK3CBP42338 AC138761.1-201ENST00000584393 385 ntBASIC14.41□□□□□ -0.1
PIK3CBP42338 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PIK3CBP42338 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.41□□□□□ -0.1
PIK3CBP42338 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3CBP42338 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3CBP42338 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3CBP42338 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3CBP42338 AL137784.3-201ENST00000623858 2288 ntBASIC14.41□□□□□ -0.1
PIK3CBP42338 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3CBP42338 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.41□□□□□ -0.1
PIK3CBP42338 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3CBP42338 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3CBP42338 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PIK3CBP42338 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3CBP42338 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3CBP42338 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3CBP42338 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PIK3CBP42338 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.41□□□□□ -0.1
PIK3CBP42338 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PIK3CBP42338 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PIK3CBP42338 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PIK3CBP42338 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.4□□□□□ -0.1
PIK3CBP42338 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 SBF1P1-201ENST00000444527 5631 ntBASIC14.4□□□□□ -0.1
PIK3CBP42338 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.4□□□□□ -0.1
PIK3CBP42338 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
PIK3CBP42338 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PIK3CBP42338 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PIK3CBP42338 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.4□□□□□ -0.1
PIK3CBP42338 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.4□□□□□ -0.1
PIK3CBP42338 AC007969.1-201ENST00000433675 447 ntBASIC14.4□□□□□ -0.1
PIK3CBP42338 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 AC011495.1-201ENST00000498085 584 ntBASIC14.4□□□□□ -0.1
PIK3CBP42338 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
PIK3CBP42338 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PIK3CBP42338 AC041040.2-201ENST00000622926 2899 ntBASIC14.4□□□□□ -0.1
PIK3CBP42338 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PIK3CBP42338 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.4□□□□□ -0.1
PIK3CBP42338 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
PIK3CBP42338 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PIK3CBP42338 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
PIK3CBP42338 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PIK3CBP42338 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PIK3CBP42338 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.4□□□□□ -0.1
PIK3CBP42338 AC134312.5-201ENST00000568031 1313 ntBASIC14.4□□□□□ -0.1
PIK3CBP42338 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3CBP42338 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.39□□□□□ -0.11
PIK3CBP42338 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3CBP42338 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3CBP42338 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
PIK3CBP42338 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3CBP42338 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PIK3CBP42338 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.39□□□□□ -0.11
PIK3CBP42338 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3CBP42338 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3CBP42338 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.39□□□□□ -0.11
PIK3CBP42338 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3CBP42338 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3CBP42338 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PIK3CBP42338 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PIK3CBP42338 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.39□□□□□ -0.11
PIK3CBP42338 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.39□□□□□ -0.11
PIK3CBP42338 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.39□□□□□ -0.11
PIK3CBP42338 AC068587.3-201ENST00000526613 355 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms