Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC18.54■□□□□ 0.56
RFC4P35249 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.54■□□□□ 0.56
RFC4P35249 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC18.54■□□□□ 0.56
RFC4P35249 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.54■□□□□ 0.56
RFC4P35249 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.54■□□□□ 0.56
RFC4P35249 AL022334.2-201ENST00000610000 484 ntBASIC18.54■□□□□ 0.56
RFC4P35249 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
RFC4P35249 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC4P35249 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC4P35249 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RFC4P35249 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFC4P35249 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC4P35249 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.53■□□□□ 0.56
RFC4P35249 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RFC4P35249 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.53■□□□□ 0.56
RFC4P35249 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFC4P35249 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RFC4P35249 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFC4P35249 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC4P35249 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC4P35249 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC4P35249 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC4P35249 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC18.53■□□□□ 0.56
RFC4P35249 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFC4P35249 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC18.53■□□□□ 0.56
RFC4P35249 ALG1L13P-202ENST00000519320 584 ntBASIC18.53■□□□□ 0.56
RFC4P35249 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.53■□□□□ 0.56
RFC4P35249 AL022344.2-201ENST00000568976 968 ntBASIC18.53■□□□□ 0.56
RFC4P35249 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC18.53■□□□□ 0.56
RFC4P35249 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.53■□□□□ 0.56
RFC4P35249 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC18.53■□□□□ 0.56
RFC4P35249 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC4P35249 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RFC4P35249 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC4P35249 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC4P35249 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RFC4P35249 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.53■□□□□ 0.56
RFC4P35249 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.53■□□□□ 0.56
RFC4P35249 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RFC4P35249 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC4P35249 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC4P35249 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC4P35249 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
RFC4P35249 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.52■□□□□ 0.56
RFC4P35249 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.52■□□□□ 0.56
RFC4P35249 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.52■□□□□ 0.56
RFC4P35249 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.52■□□□□ 0.56
RFC4P35249 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
RFC4P35249 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 KRT17P5-201ENST00000332088 839 ntBASIC18.52■□□□□ 0.56
RFC4P35249 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RFC4P35249 AL357563.1-201ENST00000404728 395 ntBASIC18.52■□□□□ 0.56
RFC4P35249 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.52■□□□□ 0.56
RFC4P35249 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.52■□□□□ 0.56
RFC4P35249 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.52■□□□□ 0.56
RFC4P35249 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC18.52■□□□□ 0.56
RFC4P35249 AC084752.1-201ENST00000509766 622 ntBASIC18.52■□□□□ 0.56
RFC4P35249 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.52■□□□□ 0.56
RFC4P35249 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC18.52■□□□□ 0.56
RFC4P35249 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.52■□□□□ 0.56
RFC4P35249 AC027237.1-201ENST00000560942 655 ntBASIC18.52■□□□□ 0.56
RFC4P35249 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.52■□□□□ 0.56
RFC4P35249 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.52■□□□□ 0.56
RFC4P35249 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.52■□□□□ 0.56
RFC4P35249 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RFC4P35249 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RFC4P35249 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
RFC4P35249 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFC4P35249 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.52■□□□□ 0.55
RFC4P35249 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
RFC4P35249 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFC4P35249 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.51■□□□□ 0.55
RFC4P35249 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms