Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A4P31645 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A4P31645 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A4P31645 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A4P31645 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 TNRC18P2-201ENST00000417666 2714 ntBASIC15.29■□□□□ 0.04
SLC6A4P31645 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A4P31645 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC6A4P31645 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC6A4P31645 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC6A4P31645 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC6A4P31645 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A4P31645 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SLC6A4P31645 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC6A4P31645 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A4P31645 DUX4L46-201ENST00000566845 751 ntBASIC15.29■□□□□ 0.04
SLC6A4P31645 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC6A4P31645 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC6A4P31645 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
SLC6A4P31645 AC244093.1-201ENST00000610837 814 ntBASIC15.29■□□□□ 0.04
SLC6A4P31645 MIR6787-201ENST00000616675 61 ntBASIC15.29■□□□□ 0.04
SLC6A4P31645 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC6A4P31645 AL162426.1-201ENST00000624141 743 ntBASIC15.29■□□□□ 0.04
SLC6A4P31645 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SLC6A4P31645 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A4P31645 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SLC6A4P31645 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC6A4P31645 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A4P31645 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC6A4P31645 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A4P31645 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC6A4P31645 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
SLC6A4P31645 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SLC6A4P31645 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC6A4P31645 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC6A4P31645 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC6A4P31645 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC6A4P31645 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC6A4P31645 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SLC6A4P31645 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC6A4P31645 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC6A4P31645 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC6A4P31645 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC6A4P31645 PUDPP3-201ENST00000445368 636 ntBASIC15.28■□□□□ 0.04
SLC6A4P31645 AC022494.1-201ENST00000466044 728 ntBASIC15.28■□□□□ 0.04
SLC6A4P31645 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC6A4P31645 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC6A4P31645 MIR3615-201ENST00000581999 87 ntBASIC15.28■□□□□ 0.04
SLC6A4P31645 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 AC007663.3-201ENST00000609632 465 ntBASIC15.28■□□□□ 0.04
SLC6A4P31645 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 FGD5P1-202ENST00000614866 2498 ntBASIC15.28■□□□□ 0.04
SLC6A4P31645 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC6A4P31645 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC6A4P31645 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms