Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HOXC12P31275 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.36□□□□□ -0.27
HOXC12P31275 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HOXC12P31275 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.36□□□□□ -0.27
HOXC12P31275 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.35□□□□□ -0.27
HOXC12P31275 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 AC023024.2-201ENST00000623561 1993 ntBASIC13.35□□□□□ -0.27
HOXC12P31275 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.35□□□□□ -0.27
HOXC12P31275 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.35□□□□□ -0.27
HOXC12P31275 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.35□□□□□ -0.27
HOXC12P31275 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.35□□□□□ -0.27
HOXC12P31275 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.35□□□□□ -0.27
HOXC12P31275 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.35□□□□□ -0.27
HOXC12P31275 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.35□□□□□ -0.27
HOXC12P31275 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.35□□□□□ -0.27
HOXC12P31275 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
HOXC12P31275 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 AL022328.3-201ENST00000607943 679 ntBASIC13.35□□□□□ -0.27
HOXC12P31275 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.35□□□□□ -0.27
HOXC12P31275 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.35□□□□□ -0.27
HOXC12P31275 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.35□□□□□ -0.27
HOXC12P31275 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
HOXC12P31275 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.35□□□□□ -0.27
HOXC12P31275 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.35□□□□□ -0.27
HOXC12P31275 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.35□□□□□ -0.27
HOXC12P31275 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.35□□□□□ -0.27
HOXC12P31275 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HOXC12P31275 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
HOXC12P31275 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HOXC12P31275 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.34□□□□□ -0.27
HOXC12P31275 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
HOXC12P31275 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HOXC12P31275 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.34□□□□□ -0.27
HOXC12P31275 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HOXC12P31275 WASH3P-207ENST00000560956 1394 ntBASIC13.34□□□□□ -0.27
HOXC12P31275 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HOXC12P31275 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HOXC12P31275 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HOXC12P31275 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HOXC12P31275 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HOXC12P31275 MSTO2P-201ENST00000314835 1709 ntBASIC13.34□□□□□ -0.27
HOXC12P31275 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HOXC12P31275 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HOXC12P31275 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.34□□□□□ -0.27
HOXC12P31275 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.34□□□□□ -0.27
HOXC12P31275 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HOXC12P31275 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms