Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF1P30408 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF1P30408 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TM4SF1P30408 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TM4SF1P30408 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF1P30408 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF1P30408 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
TM4SF1P30408 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF1P30408 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.17■□□□□ 0.5
TM4SF1P30408 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TM4SF1P30408 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF1P30408 OR6D1P-202ENST00000641007 5290 ntBASIC18.17■□□□□ 0.5
TM4SF1P30408 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TM4SF1P30408 CELP-201ENST00000411440 1249 ntTSL 5 BASIC18.17■□□□□ 0.5
TM4SF1P30408 KRT17P4-201ENST00000429445 819 ntBASIC18.17■□□□□ 0.5
TM4SF1P30408 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.17■□□□□ 0.5
TM4SF1P30408 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF1P30408 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TM4SF1P30408 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF1P30408 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF1P30408 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC18.17■□□□□ 0.5
TM4SF1P30408 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.17■□□□□ 0.5
TM4SF1P30408 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.17■□□□□ 0.5
TM4SF1P30408 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.17■□□□□ 0.5
TM4SF1P30408 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
TM4SF1P30408 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF1P30408 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.17■□□□□ 0.5
TM4SF1P30408 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.17■□□□□ 0.5
TM4SF1P30408 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.17■□□□□ 0.5
TM4SF1P30408 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TM4SF1P30408 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.17■□□□□ 0.5
TM4SF1P30408 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF1P30408 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF1P30408 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TM4SF1P30408 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF1P30408 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.17■□□□□ 0.5
TM4SF1P30408 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF1P30408 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TM4SF1P30408 AC006504.5-208ENST00000588784 2401 ntBASIC18.17■□□□□ 0.5
TM4SF1P30408 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF1P30408 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TM4SF1P30408 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.16■□□□□ 0.5
TM4SF1P30408 AC008894.3-201ENST00000624324 3103 ntBASIC18.16■□□□□ 0.5
TM4SF1P30408 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.16■□□□□ 0.5
TM4SF1P30408 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.16■□□□□ 0.5
TM4SF1P30408 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 AC025183.3-201ENST00000623526 1482 ntBASIC18.16■□□□□ 0.5
TM4SF1P30408 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TM4SF1P30408 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC18.16■□□□□ 0.5
TM4SF1P30408 FAM86B3P-203ENST00000523992 854 ntBASIC18.16■□□□□ 0.5
TM4SF1P30408 OR5BD1P-201ENST00000532527 817 ntBASIC18.16■□□□□ 0.5
TM4SF1P30408 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC18.16■□□□□ 0.5
TM4SF1P30408 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.16■□□□□ 0.5
TM4SF1P30408 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC18.16■□□□□ 0.5
TM4SF1P30408 AC055811.3-201ENST00000584952 686 ntBASIC18.16■□□□□ 0.5
TM4SF1P30408 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.16■□□□□ 0.5
TM4SF1P30408 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.16■□□□□ 0.5
TM4SF1P30408 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.16■□□□□ 0.5
TM4SF1P30408 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TM4SF1P30408 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TM4SF1P30408 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF1P30408 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.15■□□□□ 0.5
TM4SF1P30408 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TM4SF1P30408 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.15■□□□□ 0.5
TM4SF1P30408 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.15■□□□□ 0.5
TM4SF1P30408 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF1P30408 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC18.15■□□□□ 0.5
TM4SF1P30408 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.15■□□□□ 0.5
TM4SF1P30408 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms