Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.66□□□□□ -0.38
COL8A2P25067 MIR3615-201ENST00000581999 87 ntBASIC12.66□□□□□ -0.38
COL8A2P25067 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.66□□□□□ -0.38
COL8A2P25067 ZACNP1-201ENST00000612259 710 ntBASIC12.66□□□□□ -0.38
COL8A2P25067 AC005695.3-201ENST00000614522 232 ntBASIC12.66□□□□□ -0.38
COL8A2P25067 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
COL8A2P25067 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.66□□□□□ -0.38
COL8A2P25067 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.66□□□□□ -0.38
COL8A2P25067 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
COL8A2P25067 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.66□□□□□ -0.38
COL8A2P25067 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.66□□□□□ -0.38
COL8A2P25067 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.65□□□□□ -0.38
COL8A2P25067 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COL8A2P25067 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.65□□□□□ -0.38
COL8A2P25067 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.65□□□□□ -0.38
COL8A2P25067 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.65□□□□□ -0.38
COL8A2P25067 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COL8A2P25067 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
COL8A2P25067 MIR1247-201ENST00000408206 136 ntBASIC12.65□□□□□ -0.38
COL8A2P25067 AC004945.1-201ENST00000416738 983 ntBASIC12.65□□□□□ -0.38
COL8A2P25067 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.65□□□□□ -0.38
COL8A2P25067 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.65□□□□□ -0.38
COL8A2P25067 AC006033.1-201ENST00000440505 426 ntBASIC12.65□□□□□ -0.38
COL8A2P25067 CHMP1AP1-201ENST00000445563 662 ntBASIC12.65□□□□□ -0.38
COL8A2P25067 AC100850.1-201ENST00000506768 649 ntBASIC12.65□□□□□ -0.38
COL8A2P25067 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
COL8A2P25067 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.65□□□□□ -0.38
COL8A2P25067 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.65□□□□□ -0.38
COL8A2P25067 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.65□□□□□ -0.38
COL8A2P25067 MIR4683-201ENST00000579659 81 ntBASIC12.65□□□□□ -0.38
COL8A2P25067 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.65□□□□□ -0.38
COL8A2P25067 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.65□□□□□ -0.38
COL8A2P25067 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.65□□□□□ -0.38
COL8A2P25067 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.65□□□□□ -0.38
COL8A2P25067 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.65□□□□□ -0.38
COL8A2P25067 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COL8A2P25067 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.65□□□□□ -0.38
COL8A2P25067 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.65□□□□□ -0.38
COL8A2P25067 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
COL8A2P25067 WASH3P-207ENST00000560956 1394 ntBASIC12.65□□□□□ -0.38
COL8A2P25067 AC020910.5-201ENST00000623668 1865 ntBASIC12.65□□□□□ -0.38
COL8A2P25067 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COL8A2P25067 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL8A2P25067 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.65□□□□□ -0.39
COL8A2P25067 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
COL8A2P25067 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
COL8A2P25067 AC026748.1-201ENST00000624349 3251 ntBASIC12.64□□□□□ -0.39
COL8A2P25067 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COL8A2P25067 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
COL8A2P25067 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 MIR663B-201ENST00000408361 115 ntBASIC12.64□□□□□ -0.39
COL8A2P25067 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.64□□□□□ -0.39
COL8A2P25067 GPAA1P2-201ENST00000417923 928 ntBASIC12.64□□□□□ -0.39
COL8A2P25067 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.64□□□□□ -0.39
COL8A2P25067 AC079178.1-201ENST00000420915 656 ntBASIC12.64□□□□□ -0.39
COL8A2P25067 HIST2H2BB-201ENST00000449108 381 ntBASIC12.64□□□□□ -0.39
COL8A2P25067 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.64□□□□□ -0.39
COL8A2P25067 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COL8A2P25067 AP001002.3-201ENST00000623482 206 ntBASIC12.64□□□□□ -0.39
COL8A2P25067 AL008638.5-201ENST00000623814 1298 ntBASIC12.64□□□□□ -0.39
COL8A2P25067 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms