Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
XPAP23025 AC009542.2-202ENST00000619004 1067 ntBASIC15.13■□□□□ 0.01
XPAP23025 AC138466.3-201ENST00000619983 221 ntBASIC15.13■□□□□ 0.01
XPAP23025 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.13■□□□□ 0.01
XPAP23025 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.13■□□□□ 0.01
XPAP23025 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.13■□□□□ 0.01
XPAP23025 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
XPAP23025 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
XPAP23025 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
XPAP23025 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
XPAP23025 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
XPAP23025 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
XPAP23025 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
XPAP23025 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.13■□□□□ 0.01
XPAP23025 CLUHP2-201ENST00000426660 1303 ntBASIC15.13■□□□□ 0.01
XPAP23025 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
XPAP23025 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 PEG13-201ENST00000631594 5667 ntBASIC15.12■□□□□ 0.01
XPAP23025 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
XPAP23025 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
XPAP23025 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.12■□□□□ 0.01
XPAP23025 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.12■□□□□ 0.01
XPAP23025 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 AC013268.4-201ENST00000637413 2228 ntBASIC15.12■□□□□ 0.01
XPAP23025 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.12■□□□□ 0.01
XPAP23025 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.12■□□□□ 0.01
XPAP23025 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.12■□□□□ 0.01
XPAP23025 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.12■□□□□ 0.01
XPAP23025 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 AL355994.2-201ENST00000447882 704 ntBASIC15.12■□□□□ 0.01
XPAP23025 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.12■□□□□ 0.01
XPAP23025 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.12■□□□□ 0.01
XPAP23025 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.12■□□□□ 0.01
XPAP23025 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.12■□□□□ 0.01
XPAP23025 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.12■□□□□ 0.01
XPAP23025 AL583810.1-201ENST00000553344 1045 ntBASIC15.12■□□□□ 0.01
XPAP23025 DUX4L45-201ENST00000566406 1057 ntBASIC15.12■□□□□ 0.01
XPAP23025 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.12■□□□□ 0.01
XPAP23025 MIR4741-201ENST00000579822 90 ntBASIC15.12■□□□□ 0.01
XPAP23025 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 AC004466.1-201ENST00000599515 1080 ntBASIC15.12■□□□□ 0.01
XPAP23025 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.12■□□□□ 0.01
XPAP23025 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 AL033527.4-201ENST00000641026 673 ntBASIC15.12■□□□□ 0.01
XPAP23025 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 AL596257.1-201ENST00000641463 2694 ntBASIC15.12■□□□□ 0.01
XPAP23025 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.12■□□□□ 0.01
XPAP23025 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XPAP23025 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.12■□□□□ 0.01
XPAP23025 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.12■□□□□ 0.01
XPAP23025 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.11■□□□□ 0.01
XPAP23025 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
XPAP23025 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.11■□□□□ 0.01
XPAP23025 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms