Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 AL008638.4-201ENST00000624792 1315 ntBASIC11.84□□□□□ -0.51
NF1P21359 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC11.84□□□□□ -0.51
NF1P21359 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.84□□□□□ -0.51
NF1P21359 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC11.84□□□□□ -0.51
NF1P21359 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.84□□□□□ -0.51
NF1P21359 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC11.84□□□□□ -0.51
NF1P21359 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC11.84□□□□□ -0.51
NF1P21359 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC11.84□□□□□ -0.51
NF1P21359 ALG1L15P-201ENST00000482834 794 ntBASIC11.84□□□□□ -0.51
NF1P21359 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.84□□□□□ -0.51
NF1P21359 MYL6-215ENST00000549566 685 ntTSL 2 BASIC11.84□□□□□ -0.51
NF1P21359 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.84□□□□□ -0.51
NF1P21359 NAT9-204ENST00000578822 839 ntTSL 3 BASIC11.84□□□□□ -0.51
NF1P21359 Z82244.2-201ENST00000632196 448 ntBASIC11.84□□□□□ -0.51
NF1P21359 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NF1P21359 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.84□□□□□ -0.51
NF1P21359 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.84□□□□□ -0.51
NF1P21359 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC11.84□□□□□ -0.51
NF1P21359 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.84□□□□□ -0.51
NF1P21359 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.84□□□□□ -0.51
NF1P21359 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
NF1P21359 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NF1P21359 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.51
NF1P21359 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
NF1P21359 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC11.83□□□□□ -0.52
NF1P21359 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC11.83□□□□□ -0.52
NF1P21359 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC11.83□□□□□ -0.52
NF1P21359 POLR2LP1-206ENST00000444785 187 ntBASIC11.83□□□□□ -0.52
NF1P21359 AC006122.1-201ENST00000493323 440 ntBASIC11.83□□□□□ -0.52
NF1P21359 OR5BD1P-201ENST00000532527 817 ntBASIC11.83□□□□□ -0.52
NF1P21359 TRMT112P3-201ENST00000580149 358 ntBASIC11.83□□□□□ -0.52
NF1P21359 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC11.83□□□□□ -0.52
NF1P21359 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC11.83□□□□□ -0.52
NF1P21359 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NF1P21359 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC11.83□□□□□ -0.52
NF1P21359 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.83□□□□□ -0.52
NF1P21359 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.83□□□□□ -0.52
NF1P21359 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
NF1P21359 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 AC008894.3-201ENST00000624324 3103 ntBASIC11.83□□□□□ -0.52
NF1P21359 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
NF1P21359 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC11.83□□□□□ -0.52
NF1P21359 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC11.83□□□□□ -0.52
NF1P21359 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC11.83□□□□□ -0.52
NF1P21359 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC11.83□□□□□ -0.52
NF1P21359 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC11.83□□□□□ -0.52
NF1P21359 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC11.83□□□□□ -0.52
NF1P21359 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.83□□□□□ -0.52
NF1P21359 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
NF1P21359 AC127383.1-201ENST00000444697 1800 ntBASIC11.83□□□□□ -0.52
NF1P21359 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.83□□□□□ -0.52
NF1P21359 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
NF1P21359 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.83□□□□□ -0.52
NF1P21359 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NF1P21359 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.82□□□□□ -0.52
NF1P21359 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NF1P21359 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NF1P21359 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC11.82□□□□□ -0.52
NF1P21359 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NF1P21359 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC11.82□□□□□ -0.52
NF1P21359 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC11.82□□□□□ -0.52
NF1P21359 RN7SL363P-201ENST00000482412 273 ntBASIC11.82□□□□□ -0.52
NF1P21359 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC11.82□□□□□ -0.52
NF1P21359 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC11.82□□□□□ -0.52
NF1P21359 BX322534.1-201ENST00000635574 241 ntBASIC11.82□□□□□ -0.52
NF1P21359 AC215524.1-201ENST00000635696 241 ntBASIC11.82□□□□□ -0.52
NF1P21359 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NF1P21359 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.82□□□□□ -0.52
NF1P21359 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NF1P21359 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NF1P21359 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms