Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 OR5BD1P-201ENST00000532527 817 ntBASIC16.02■□□□□ 0.16
SYN1P17600 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.02■□□□□ 0.16
SYN1P17600 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.02■□□□□ 0.16
SYN1P17600 MIR2392-201ENST00000584881 84 ntBASIC16.02■□□□□ 0.16
SYN1P17600 NAV1-210ENST00000593583 726 ntBASIC16.02■□□□□ 0.16
SYN1P17600 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.02■□□□□ 0.16
SYN1P17600 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.02■□□□□ 0.16
SYN1P17600 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SYN1P17600 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.02■□□□□ 0.15
SYN1P17600 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYN1P17600 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SYN1P17600 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYN1P17600 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYN1P17600 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SYN1P17600 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SYN1P17600 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SYN1P17600 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
SYN1P17600 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SYN1P17600 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYN1P17600 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SYN1P17600 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SYN1P17600 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SYN1P17600 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYN1P17600 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.01■□□□□ 0.15
SYN1P17600 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.01■□□□□ 0.15
SYN1P17600 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.01■□□□□ 0.15
SYN1P17600 AC007292.2-201ENST00000593524 1812 ntBASIC16.01■□□□□ 0.15
SYN1P17600 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.01■□□□□ 0.15
SYN1P17600 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.01■□□□□ 0.15
SYN1P17600 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
SYN1P17600 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 PTGER4P2-201ENST00000328411 252 ntBASIC16.01■□□□□ 0.15
SYN1P17600 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.01■□□□□ 0.15
SYN1P17600 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC16.01■□□□□ 0.15
SYN1P17600 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SYN1P17600 KRT18P46-201ENST00000435568 1279 ntBASIC16.01■□□□□ 0.15
SYN1P17600 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.01■□□□□ 0.15
SYN1P17600 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.01■□□□□ 0.15
SYN1P17600 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.01■□□□□ 0.15
SYN1P17600 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.01■□□□□ 0.15
SYN1P17600 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.01■□□□□ 0.15
SYN1P17600 PTGER4P3-201ENST00000458150 252 ntBASIC16.01■□□□□ 0.15
SYN1P17600 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.01■□□□□ 0.15
SYN1P17600 ALG3P1-201ENST00000508806 1114 ntBASIC16.01■□□□□ 0.15
SYN1P17600 RNA5SP406-201ENST00000516106 112 ntBASIC16.01■□□□□ 0.15
SYN1P17600 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.01■□□□□ 0.15
SYN1P17600 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.01■□□□□ 0.15
SYN1P17600 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.01■□□□□ 0.15
SYN1P17600 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.01■□□□□ 0.15
SYN1P17600 AL118522.1-201ENST00000611368 560 ntBASIC16.01■□□□□ 0.15
SYN1P17600 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.01■□□□□ 0.15
SYN1P17600 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SYN1P17600 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.01■□□□□ 0.15
SYN1P17600 AC025183.3-201ENST00000623526 1482 ntBASIC16.01■□□□□ 0.15
SYN1P17600 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.01■□□□□ 0.15
SYN1P17600 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SYN1P17600 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SYN1P17600 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.01■□□□□ 0.15
SYN1P17600 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.01■□□□□ 0.15
SYN1P17600 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYN1P17600 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.01■□□□□ 0.15
SYN1P17600 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
SYN1P17600 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SYN1P17600 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SYN1P17600 SALL4P5-201ENST00000419001 1760 ntBASIC16■□□□□ 0.15
SYN1P17600 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16■□□□□ 0.15
SYN1P17600 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SYN1P17600 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16■□□□□ 0.15
SYN1P17600 AHCYP4-201ENST00000419201 1315 ntBASIC16■□□□□ 0.15
SYN1P17600 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16■□□□□ 0.15
SYN1P17600 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SYN1P17600 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SYN1P17600 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SYN1P17600 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SYN1P17600 ZBED1P1-201ENST00000502364 1930 ntBASIC16■□□□□ 0.15
SYN1P17600 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SYN1P17600 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16■□□□□ 0.15
SYN1P17600 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms